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A protein decomplexation strategy in snake venom proteomics
圖書章節

A protein decomplexation strategy in snake venom proteomics

Choo Hock Tan, Kae Yi TanNget Hong Tan
Methods in Molecular Biology, 卷.1871, 頁碼.83-92
2019
PMID: 30276733

摘要

Protein decomplexation Reverse-phase high-performance liquid chromatography Snake venom Tandem mass spectrometry Venom separation Venomics Molecular Biology Genetics
Snake venoms are complex mixtures of proteins and peptides that play vital roles in the survival of venomous snakes. As with their diverse pharmacological activities, snake venoms can be highly variable, hence the importance of understanding the compositional details of different snake venoms. However, profiling venom protein mixtures is challenging, in particular when dealing with the diversity of protein subtypes and their abundances. Here we described an optimized strategy combining a protein decomplexation method with in-solution trypsin digestion and mass spectrometry of snake venom proteins. The approach involves the integrated use of C 18 reverse-phase high-performance liquid chromatography (RP-HPLC), sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), and nano-electrospray ionization tandem mass spectrometry (nano-ESI-LC-MS/MS).

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