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Parallelizing the Hamiltonian computation in DQMC simulations: Checkerboard method for sparse matrix exponentials on multicore and GPU
Conference paper

Parallelizing the Hamiltonian computation in DQMC simulations: Checkerboard method for sparse matrix exponentials on multicore and GPU

Che-Rung Lee, Zhi-Hung Chen and Quey-Liang Kao
Proceedings of the 2012 IEEE 26th International Parallel and Distributed Processing Symposium Workshops, IPDPSW 2012, pp.1889-1897
2012

Abstract

GPU Matrix exponential Multicore Quantum Monte Carlo Simulation Sparse matrices
Determinant Quantum Monte Carlo (DQMC) simulation is one of few numerical methods that can explore the micro properties of fermions, which has many technically important applications in chemistry and material science. Conventionally, its parallelization relies on parallel Monte Carlo method, whose speedup is limited by the thermalization process and the underlying matrix computation. To achieve better performance, fine-grained parallelization on its numerical kernel is essential to utilize the massive parallel processing units, which are multicores and/or GPUs interconnected by high performance network. In this paper, we address the parallelization on one of the matrix kernel in the DQMC simulations: the multiplication of matrix exponentials. The matrix is derived from the kinetic Hamiltonian, which is highly sparse. We approximate its exponential by the checkerboard method, which decomposes the matrix exponential into a product of a sequence of block sparse matrices. We analyze the block sparse matrices of two common used lattice geometry: 2D torus and 3D cubic, and parallelize the computational kernel of multiplying them to a general matrix. The parallel algorithm is designed for multicore CPU and GPU. The results of experiments showed on a quad core processor, 3 times speedup can be observed in average, and on GPU, 145 times speedup is achievable. © 2012 IEEE.

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