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The full Steiner tree problem in phylogen
Conference paper   Peer reviewed

The full Steiner tree problem in phylogen

C.L. Lu, C.Y. Tang and R.C.T. Lee
Proceedings of the Eighth Annual International Computing and Combinatorics Conference, Vol.2387, pp.107-179
2002

Abstract

full Steiner tree
Motivated by the reconstruction of phylogenetic tree in biology, we study the full Steiner tree problem in this paper. Given a complete graph G = (V, E) with a length function on E and a proper subset R ⊂ V, the problem is to find a full Steiner tree of minimum length in G, which is a kind of Steiner tree with all the vertices of R as its leaves. In this paper, we show that this problem is NP-complete and MAX SNP-hard, even when the lengths of the edges are restricted to either 1 or 2. For the instances with lengths either 1 or 2, we give a 5/3-approximation algorithm to find an approximate solution for the problem.

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