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Amplifier-based quorum sensing design via promoter-RBS library for metal ions detection enhancement in Escherichia coli
Thesis

Amplifier-based quorum sensing design via promoter-RBS library for metal ions detection enhancement in Escherichia coli

Chen, Bing-Kun
Masters, 國立清華大學, 電機工程學系
2014

Abstract

群體感應 金屬離子偵測 感測器 放大器 quorum sensing metal ion detection biosensor amplifier
Synthetic biology reengineers cell programs and employees mathematical methods for the purposes of the medical treatment, green energy and environment remediation etc.. In this study, an amplifier-based biosensor is designed for enhancing the metal ion detection performance. The proposed amplifier utilizes the difference of cell membrane permeability and promoter abilities between metal ion-induced system and bacteria quorum sensing system to achieve the amplifying function. For the applications of amplifier-based biosensor, we choose two copper-induced systems and one lead-induced system to exploit the better metal ion detection performance of the amplifier-based biosensor system than that of the conventional biosensor system. After constructing the dynamic equations of synthetic genetic circuits, we could predict the cell responses with well-characteristic component libraries and well-identified kinetic parameters. And with the selection of various strengths promoter-RBS components in the amplifier part of amplifier-based biosensor system, we can offer different detection specifications of amplifier-based biosensor system in silicon. Selection of various promoter-RBS components from the corresponding component libraries could provide designer with different detection requirement of metal ion biosensor. Finally, the experimental results verify that the proposed amplifier-based biosensor exactly could enhance the detection ability of metal ions.

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