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以基因演算法為基礎之布林延遲模型模擬細胞內訊號傳遞網路之動態行為
Thesis

以基因演算法為基礎之布林延遲模型模擬細胞內訊號傳遞網路之動態行為

Kang, Chu-Chun
Masters, 國立清華大學, 資訊工程學系
2009

Abstract

基因演算法 布林模型 訊號傳遞 動態行為 genetic algorithm Boolean model Signal transduction dynamics
In this study, we propose Boolean delay equation to construct dynamic networks of signaling pathways and employs genetic algorithm to determine the time delay of model. We focus the signal transduction in TNF-α / TLR4 / IL-1 pathway, which play important roles in inflammatory response. First, we introduce a concept of signal transduction and various modeling approach. Then, we illustrate a genetic algorithm-based Boolean delay model and the workflow of this approach. Finally, we are able to identify key network components that lead to these properties and generate the parameter of model automatically. Through the investigation of different stimuli and simulated knockout prediction, we expect to give the in-depth knowledge with the signal transduction pathway.

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