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從陽離子peptide與肝素結合的構形變化到藥物設計
Thesis

從陽離子peptide與肝素結合的構形變化到藥物設計

方志成
Masters, National Tsing Hua University
1997

Abstract

肝素構形變化陽離子peptide heparin binding peptideStructural and functional studies
肝素(Heparin)屬於GAGs(glycosaminoglycans)其中之一,其作用常用於心臟脈管手術(cardiopulmonary bypass) 之抗凝劑,以防止血管栓塞,如果肝素使用過量,臨床上則利用硫酸魚精蛋白(protamine sulphate)逆轉肝素的抗凝血作用。目前發現許多種蛋白質或peptide會肝素,為了更進一步探討肝素與peptide的交互作用對二級結構的影響與對凝血機制的作用,我們設計以(i,i+3和i,i+4)的離胺酸(lysine)所間隔的peptide "K34"和與肝素作用並比較硫酸魚精蛋白與肝素作用。 藉由以CD (CircularDichroism)觀察這兩條peptide與肝素作用關係,隨著肝素逐漸加入K34,K34的結構從無序結構(random coil)變成a螺旋結構(a-helix),與肝素形成的鹽橋(salt-bridge)對於K34的a螺旋結構有重要的影響。就抗凝血實驗而言,K34單獨存在下不會影響外因性凝血路徑(extrinsic pathway),而且能夠逆轉肝素的抗凝血作用,反觀硫酸魚精蛋白雖然有較強逆轉肝素所造成的抗凝血作用,不過硫酸魚精蛋白單獨存在也會有抗凝血的作用。在HiTrap肝素的實驗中發現K34的作用比硫酸魚精蛋白還要弱,推測在內因性凝血路徑(intrinsic pathway)中看不到K34有逆肝素抗凝血作用,可能是因為K34與肝素的作用力較弱。本實驗看到K34如我們所預期能夠逆轉肝素的抗凝血作用,而且可以避免過量使用之下出現像硫酸魚精蛋白的抗凝血作用,至於逆轉肝素在內因性凝血路徑的作用,則需要再設計與肝素作用較強的peptide。Heparin, one of the glycosaminoglycans, is used to preventthe patients from thrombosis in cardiopumlonary bypass. Toreverse the heparin anticoagulation, protamine sulphate isfrequently applied to interact with heparin followingcardiopunlmonary bypass procedures. Many proteins and peptidesare able to interact with heparin. In this study, we design apeptide "K34" which contains many lysine residues at either (i,i+3) or (i,i+4) relative poistions to investigate theinteractions between proteins and he Our results showed thatK34 was able to reverse heparin anticoagulation, and no reverseanticoagulation in intrinsic pathway was observed. In the studyof CD spectroscopy, we found that the conformation of K34changed from random coil to a-helix resulting from the additionof heparin. We attribute this conformation alternation to thesalt bridges between the poistively charged residues of K34 andthe negatively charged sulphate group of heparin. The resultfrom Hitrip heparin experiment showed that the a

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