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Cryo-EM Studies of Pre-mRNA Splicing: From Sample Preparation to Model Visualization
期刊文章

Cryo-EM Studies of Pre-mRNA Splicing: From Sample Preparation to Model Visualization

Max E. Wilkinson, Pei-Chun Lin, Clemens PlaschkaKiyoshi Nagai
Annual Review of Biophysics, 卷.47, 頁碼.175-199
05/2018
PMID: 29494253

摘要

electron microscopy RNA-protein complexes spliceosome structural biology Biophysics Structural Biology Bioengineering Biochemistry Cell Biology
The removal of noncoding introns from pre-messenger RNA (pre-mRNA) is an essential step in eukaryotic gene expression and is catalyzed by a dynamic multi-megadalton ribonucleoprotein complex called the spliceosome. The spliceosome assembles on pre-mRNA substrates by the stepwise addition of small nuclear ribonucleoprotein particles and numerous protein factors. Extensive remodeling is required to form the RNA-based active site and to mediate the pre-mRNA branching and ligation reactions. In the past two years, cryo-electron microscopy (cryo-EM) structures of spliceosomes captured in different assembly and catalytic states have greatly advanced our understanding of its mechanism. This was made possible by long-standing efforts in the purification of spliceosome intermediates as well as recent developments in cryo-EM imaging and computational methodology. The resulting high-resolution densities allow for de novo model building in core regions of the complexes. In peripheral and less ordered regions, the combination of cross-linking, bioinformatics, biochemical, and genetic data is essential for accurate modeling. Here, we summarize these achievements and highlight the critical steps in obtaining near-atomic resolution structures of the spliceosome.

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