Logo image
Detection of Escherichia coli using nucleic acid sequence-based amplification and oligonucleotide probes for 16S ribosomal RNA
Journal article   Peer reviewed

Detection of Escherichia coli using nucleic acid sequence-based amplification and oligonucleotide probes for 16S ribosomal RNA

Mou-Chieh Kao and Richard A. Durst
Analytical Letters, Vol.43(10-11), pp.1756-1769
07/2010

Abstract

16s rRNA E. coli Escherichia coli NASBA Nucleic acid sequence-based amplification Viable pathogen detection
The use of nucleic acid sequence-based amplification (NASBA), a continuous and isothermal method of in vitro nucleic acid amplification, was investigated for the specific identification of Escherichia coli (E. coli). A set of primers was selected from a highly conserved region of the 16S rRNA sequence of E. coli sandwiching a variable sequence to perform the amplification of bacterial RNA using NASBA. A probe was identified and shown to hybridize specifically to the amplified single-stranded RNA products of all tested E. coli isolates, including enterohemorrhagic serotype O157:H7. The high sensitivity of this assay system is most likely due to the large amplification power of NASBA and the high copy number of 16S rRNA. © Taylor & Francis Group, LLC.

Metrics

1 Record Views

Details

Logo image