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Development of pcr primer sets for intron 1 of the low-copy gene leafy in davalliaceae
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Development of pcr primer sets for intron 1 of the low-copy gene leafy in davalliaceae

Cheng-Wei Chen, Li-Yaung Kuo, Chun-Neng WangWen-Liang Chiou
American Journal of Botany, 卷.99(6)
06/2012
PMID: 22623608

摘要

Davalliaceae Fern Humata repens LEAFY intron 1 Low-copy nuclear marker Ecology Evolution Behavior and Systematics Genetics Plant Science
Premise of the study: Primers were designed for amplifying intron 1 of the single-copy nuclear LEAFY gene for species of Davalliaceae. Methods and Results: New primer sets were designed and successfully amplified for intron 1 of the LEAFY gene in 13 species representing the five genera of Davalliaceae. The orthology of these sequences was further confirmed by phylogenetic analyses. Site variation in LEAFY intron 1 sequences across genera of the Davalliaceae and among accessions of the Humata repens complex were 18% and 8%, respectively. Such variation was greater than that for the cpDNA atpB-rbcL intergenic spacer region across the same taxa and accessions. Conclusions: Using our newly designed primers, intron 1 of the LEAFY gene could be amplified for all species tested. In addition, this single-copy, biparentally inherited, and quickly evolving region showed considerable potential for addressing infraspecific-level questions. © 2012 Botanical Society of America.

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