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Positively Correlated Samples Save Pooled Testing Costs
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Positively Correlated Samples Save Pooled Testing Costs

Yi-Jheng Lin, Che-Hao Yu, Tzu-Hsuan Liu, Cheng-Shang ChangWen-Tsuen Chen
IEEE Transactions on Network Science and Engineering
2021

摘要

Closed-form solutions Correlation COVID-19 COVID-19 group testing Markov modulated processes Markov processes Random variables regenerative processes social networks Sociology Testing Control and Systems Engineering Computer Science Applications Computer Networks and Communications
The group testing approach that achieves significant cost reduction over the individual testing approach has received a lot of interest lately for massive testing of COVID-19. Many studies simply assume samples mixed in a group are independent. However, this assumption may not be reasonable for a contagious disease like COVID-19. Specifically, people within a family tend to infect each other and thus are likely to be positively correlated. By exploiting positive correlation, we make the following two main contributions. One is to provide a rigorous proof that further cost reduction can be achieved by using the Dorfman two-stage method when samples within a group are positively correlated. The other is to propose a hierarchical agglomerative algorithm for pooled testing with a social graph, where an edge in the social graph connects frequent social contacts between two persons. Such an algorithm leads to notable cost reduction (roughly 20%-35%) compared to random pooling when the Dorfman two-stage algorithm is applied.

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https://doi.org/10.1109/TNSE.2021.3081759檢視
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