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Purification, crystallization and preliminary X-ray analysis of an aminoacylhistidine dipeptidase (PepD) from Vibrio alginolyticus
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Purification, crystallization and preliminary X-ray analysis of an aminoacylhistidine dipeptidase (PepD) from Vibrio alginolyticus

Chin-Yuan Chang, Yin-Cheng Hsieh, Ting-Yi Wang, Chun-Jung ChenTung-Kung Wu
Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 卷.65(3), 頁碼.216-218
2009
PMID: 19255468

摘要

Aminoacylhistidine dipeptidases Metallopeptidases Vibrio alginolyticus Biophysics Structural Biology Biochemistry Genetics Condensed Matter Physics
The aminoacylhistidine dipeptidase (PepD) protein encoded by Vibrio alginolyticus pepD was successfully overexpressed and characterized and the putative active-site residues responsible for metal binding and catalysis were identified. The purified enzyme contained two zinc ions per monomer. The recombinant dipeptidase enzyme, which was identified as a homodimer in solution, exhibited broad substrate specificity for Xaa-His dipeptides, with highest activity towards the His-His dipeptide. The purified protein was crystallized using the hanging-drop vapour-diffusion method. Preliminary crystallographic analysis showed that the crystal belonged to space group P6 1 or P6 5 , with unit-cell parameters a = b = 80.42, c = 303.11 Å. The crystal contained two molecules per asymmetric unit and the predicted solvent content was 53.4%. © 2009 International Union of Crystallography All rights reserved.

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