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ROBIN: A tool for genome rearrangement of block-interchanges
Journal article   Open access   Peer reviewed

ROBIN: A tool for genome rearrangement of block-interchanges

Chin Lung Lu, Tsui Ching Wang, Ying Chih Lin and Chuan Yi Yang
Bioinformatics, Vol.21(11), pp.2780-2782
01/06/2005

Abstract

Summary: ROBIN is a web server for analyzing genome rearrangement of block-interchanges between two chromosomal genomes. It takes two or more linear/circular chromosomes as its input, and computes the number of minimum block-interchange rearrangements between any two input chromosomes for transforming one chromosome into another and also determines an optimal scenario taking this number of rearrangements. The input can be either bacterial-size sequence data or landmark-order data. If the input is sequence data, ROBIN will automatically search for the identical landmarks that are the homologous/conserved regions shared by all the input sequences. © The Author 2005. Published by Oxford University Press. All rights reserved.
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https://doi.org/10.1093/bioinformatics/bti412View
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