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SYNAPSE: An international roadmap to large brain imaging
Journal article

SYNAPSE: An international roadmap to large brain imaging

Jun Hu, Ching-Che Charng, Anton P.J. Stampfl, H. Takano, Kei Sawada, Giorgio Margaritondo, Ann-Shyn Chiang, Zhongdong Liu and 中泉 羅
PHysics Reports, Vol.999, pp.1-60
2023

Abstract

brain mapping;radiology;x-rays;synchrontron;phase contrast;supercomputing

Since 2020, synchrotron radiation facilities in several Asia-Pacific countries have been collaborating in a major project called “SYNAPSE” (Synchrotrons for Neuroscience: an Asia-Pacific Scientific Enterprise). They use x-ray imaging to attack in a coordinated fashion one of the major issues in modern science: the structure of animal and human brains, including neurons and connections. The objective is to develop Google-like maps also including detailed structural and functional information for selected regions of interest. The sheer mass of data needed for the objective poses huge problems for the acquisition, processing, storage and use of images. In order to complete the task within a reasonable time, the key element of the SYNAPSE strategy is the parallel and coordinated work of several facilities on the same specimens. This article reviews different aspects of the enterprise, including the foundations of synchrotron radiation, coherence and of its role in advanced imaging, electron accelerators, x-ray optics and detectors. This will provide the foundation for an extensive presentation of the different components of SYNAPSE, with an overview of results already obtained within the consortium.

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