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Subtree transfer distance for degree-D phylogenies
Journal article   Peer reviewed

Subtree transfer distance for degree-D phylogenies

Wing-Kai Hon, Tak-Wah Lam, Siu-Ming Yiu, Ming-Yang Kao and Wing-Kin Sung
International Journal of Foundations of Computer Science, Vol.15(6), pp.893-909
2004

Abstract

approximation algorithms Evolutionary trees NP-hardness
The subtree transfer (STT) distance is one of the distance metric for comparing phylogenies. Previous work on computing the STT distance considered degree-3 trees only. In this paper, we give an approximation algorithm for the STT distance for degree-d trees with arbitrary d and with generalized STT operations. Also, some NP-hardness results related to STT distance are presented. © 2004 World Scientific Publishing Company.

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