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Systematic approach to Escherichia coli cell population control using a genetic lysis circuit
Journal article   Open access   Peer reviewed

Systematic approach to Escherichia coli cell population control using a genetic lysis circuit

Chih-Yuan Hsu, Tsu-Chun Yu, Ling-Jiun Lin, Rei-Hsing Hu and Bor-Sen Chen
BMC Systems Biology, Vol.8(5), S7
12/12/2014

Abstract

Cell population control Genetic lysis circuit Promoter-RBS library
Background: Cell population control allows for the maintenance of a specific cell population density. In this study, we use lysis gene BBa_K117000 from the Registry of Standard Biological Parts, formed by MIT, to lyse Escherichia coli (E. coli). The lysis gene is regulated by a synthetic genetic lysis circuit, using an inducer-regulated promoter-RBS component. To make the design more easily, it is necessary to provide a systematic approach for a genetic lysis circuit to achieve control of cell population density. Results: Firstly, the lytic ability of the constructed genetic lysis circuit is described by the relationship between the promoter-RBS components and inducer concentration in a steady state model. Then, three types of promoter-RBS libraries are established. Finally, according to design specifications, a systematic design approach is proposed to provide synthetic biologists with a prescribed I/O response by selecting proper promoter-RBS component set in combination with suitable inducer concentrations, within a feasible range. Conclusion: This study provides an important systematic design method for the development of next-generation synthetic gene circuits, from component library construction to genetic circuit assembly. In future, when libraries are more complete, more precise cell density control can be achieved.
url
https://doi.org/10.1186/1752-0509-8-S5-S7View
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